Topic outline

  • General

    Vital-IT Genome Assembly Workshop

    Lausanne, 10 March 2010

    Correctly assembling a genome with short reads is often a challenge, especially de novo and even with a good reference for finding inversion for example.
    During this one day workshop, we propose to discuss the following problems and their potential solutions:

    a) management and cleaning of the data
    b) compare the different software
    c) file format issues
    d) visualization of the data
    e) other